Structural Bioinformatics

Structural bioinformatics

Motivation: Protein-protein complexes are known to play key roles in many cellular processes. However, they are often not accessible to experimental study because of their low stability and difficulty to produce the proteins and assemble them in native conformation. Thus, docking algorithms have been developed to provide an in silico approach of the problem. A protein-protein docking procedure ...

Bioinformatics III: Structural Bioinformatics and Genome Analysis

Bioinformatics in structural genomics.

Structural Bioinformatics for Protein Engineering

Utility library for structural bioinformatics

In this Note we present a new software library for structural bioinformatics. The library contains programs, computing sequence- and profile-based alignments and a variety of structural calculations with user-friendly handling of various data formats. The software organization is very flexible. Algorithms are written in Java language and may be used by Java programs. Moreover the modules can be...